Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox2P48432 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox2P48432 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox2P48432 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.85■□□□□ 0.93
Sox2P48432 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.85■□□□□ 0.93
Sox2P48432 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox2P48432 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sox2P48432 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox2P48432 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox2P48432 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox2P48432 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sox2P48432 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sox2P48432 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox2P48432 Nkain2-201ENSMUST00000092602 558 ntBASIC20.83■□□□□ 0.93
Sox2P48432 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox2P48432 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox2P48432 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox2P48432 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox2P48432 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox2P48432 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.82■□□□□ 0.92
Sox2P48432 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.82■□□□□ 0.92
Sox2P48432 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox2P48432 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox2P48432 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.81■□□□□ 0.92
Sox2P48432 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox2P48432 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.81■□□□□ 0.92
Sox2P48432 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox2P48432 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox2P48432 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox2P48432 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox2P48432 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox2P48432 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox2P48432 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
Sox2P48432 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sox2P48432 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox2P48432 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox2P48432 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.79■□□□□ 0.92
Sox2P48432 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox2P48432 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sox2P48432 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox2P48432 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox2P48432 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sox2P48432 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox2P48432 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox2P48432 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox2P48432 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sox2P48432 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.77■□□□□ 0.92
Sox2P48432 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sox2P48432 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.76■□□□□ 0.91
Sox2P48432 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox2P48432 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox2P48432 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sox2P48432 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox2P48432 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sox2P48432 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox2P48432 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox2P48432 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sox2P48432 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.74■□□□□ 0.91
Sox2P48432 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox2P48432 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox2P48432 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox2P48432 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sox2P48432 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.73■□□□□ 0.91
Sox2P48432 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox2P48432 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox2P48432 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.73■□□□□ 0.91
Sox2P48432 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox2P48432 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox2P48432 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox2P48432 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox2P48432 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox2P48432 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox2P48432 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox2P48432 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox2P48432 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox2P48432 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox2P48432 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox2P48432 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sox2P48432 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox2P48432 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sox2P48432 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox2P48432 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.69■□□□□ 0.9
Sox2P48432 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox2P48432 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox2P48432 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox2P48432 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.69■□□□□ 0.9
Sox2P48432 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox2P48432 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox2P48432 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox2P48432 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sox2P48432 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox2P48432 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox2P48432 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox2P48432 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms