Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmx3P42581 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmx3P42581 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmx3P42581 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Hmx3P42581 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmx3P42581 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmx3P42581 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmx3P42581 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmx3P42581 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.4■□□□□ 0.54
Hmx3P42581 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmx3P42581 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmx3P42581 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmx3P42581 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmx3P42581 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmx3P42581 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmx3P42581 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmx3P42581 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Hmx3P42581 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmx3P42581 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmx3P42581 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmx3P42581 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Hmx3P42581 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.35■□□□□ 0.53
Hmx3P42581 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmx3P42581 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmx3P42581 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmx3P42581 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmx3P42581 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hmx3P42581 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmx3P42581 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmx3P42581 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmx3P42581 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.33■□□□□ 0.52
Hmx3P42581 Nkain2-201ENSMUST00000092602 558 ntBASIC18.33■□□□□ 0.52
Hmx3P42581 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmx3P42581 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmx3P42581 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmx3P42581 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmx3P42581 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmx3P42581 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.32■□□□□ 0.52
Hmx3P42581 Iqck-206ENSMUST00000208658 2891 ntBASIC18.32■□□□□ 0.52
Hmx3P42581 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmx3P42581 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmx3P42581 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmx3P42581 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hmx3P42581 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hmx3P42581 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmx3P42581 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmx3P42581 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hmx3P42581 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmx3P42581 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hmx3P42581 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hmx3P42581 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.3■□□□□ 0.52
Hmx3P42581 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmx3P42581 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Hmx3P42581 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Hmx3P42581 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmx3P42581 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmx3P42581 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmx3P42581 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmx3P42581 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hmx3P42581 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hmx3P42581 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hmx3P42581 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmx3P42581 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.28■□□□□ 0.52
Hmx3P42581 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmx3P42581 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmx3P42581 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmx3P42581 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.27■□□□□ 0.52
Hmx3P42581 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.27■□□□□ 0.52
Hmx3P42581 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.27■□□□□ 0.52
Hmx3P42581 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hmx3P42581 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hmx3P42581 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.27■□□□□ 0.52
Hmx3P42581 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hmx3P42581 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmx3P42581 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmx3P42581 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hmx3P42581 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmx3P42581 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmx3P42581 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmx3P42581 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms