Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18■□□□□ 0.47
Cd27P41272 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cd27P41272 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cd27P41272 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd27P41272 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cd27P41272 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.99■□□□□ 0.47
Cd27P41272 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cd27P41272 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cd27P41272 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd27P41272 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd27P41272 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd27P41272 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd27P41272 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.98■□□□□ 0.47
Cd27P41272 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.98■□□□□ 0.47
Cd27P41272 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd27P41272 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd27P41272 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cd27P41272 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd27P41272 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.97■□□□□ 0.47
Cd27P41272 Gm27502-201ENSMUST00000183495 199 ntBASIC17.97■□□□□ 0.47
Cd27P41272 Mir6538-201ENSMUST00000183713 110 ntBASIC17.97■□□□□ 0.47
Cd27P41272 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd27P41272 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd27P41272 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd27P41272 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.96■□□□□ 0.47
Cd27P41272 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd27P41272 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Cd27P41272 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cd27P41272 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Cd27P41272 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd27P41272 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd27P41272 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd27P41272 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.93■□□□□ 0.46
Cd27P41272 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd27P41272 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.93■□□□□ 0.46
Cd27P41272 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd27P41272 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd27P41272 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.92■□□□□ 0.46
Cd27P41272 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cd27P41272 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd27P41272 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd27P41272 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd27P41272 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.91■□□□□ 0.46
Cd27P41272 Gm44428-201ENSMUST00000204474 874 ntBASIC17.91■□□□□ 0.46
Cd27P41272 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd27P41272 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cd27P41272 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd27P41272 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cd27P41272 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.9■□□□□ 0.46
Cd27P41272 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd27P41272 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cd27P41272 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cd27P41272 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cd27P41272 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd27P41272 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd27P41272 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.88■□□□□ 0.45
Cd27P41272 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd27P41272 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cd27P41272 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cd27P41272 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cd27P41272 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
Cd27P41272 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.87■□□□□ 0.45
Cd27P41272 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cd27P41272 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cd27P41272 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd27P41272 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.86■□□□□ 0.45
Cd27P41272 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.86■□□□□ 0.45
Cd27P41272 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cd27P41272 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd27P41272 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.85■□□□□ 0.45
Cd27P41272 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Gm12366-201ENSMUST00000121722 873 ntBASIC17.85■□□□□ 0.45
Cd27P41272 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.85■□□□□ 0.45
Cd27P41272 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cd27P41272 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms