Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdkn1aP39689 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cdkn1aP39689 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn1aP39689 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn1aP39689 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn1aP39689 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdkn1aP39689 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn1aP39689 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.45■□□□□ 0.54
Cdkn1aP39689 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn1aP39689 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.44■□□□□ 0.54
Cdkn1aP39689 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn1aP39689 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn1aP39689 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn1aP39689 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn1aP39689 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cdkn1aP39689 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdkn1aP39689 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdkn1aP39689 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkn1aP39689 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkn1aP39689 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkn1aP39689 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkn1aP39689 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkn1aP39689 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkn1aP39689 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkn1aP39689 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkn1aP39689 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkn1aP39689 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkn1aP39689 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkn1aP39689 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdkn1aP39689 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkn1aP39689 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkn1aP39689 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkn1aP39689 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkn1aP39689 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdkn1aP39689 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkn1aP39689 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkn1aP39689 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkn1aP39689 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkn1aP39689 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.36■□□□□ 0.53
Cdkn1aP39689 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkn1aP39689 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkn1aP39689 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.34■□□□□ 0.53
Cdkn1aP39689 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkn1aP39689 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkn1aP39689 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkn1aP39689 Gm5921-201ENSMUST00000075898 882 ntBASIC18.34■□□□□ 0.53
Cdkn1aP39689 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkn1aP39689 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkn1aP39689 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkn1aP39689 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkn1aP39689 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkn1aP39689 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.33■□□□□ 0.52
Cdkn1aP39689 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn1aP39689 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn1aP39689 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkn1aP39689 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn1aP39689 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn1aP39689 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cdkn1aP39689 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkn1aP39689 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cdkn1aP39689 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn1aP39689 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn1aP39689 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.31■□□□□ 0.52
Cdkn1aP39689 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cdkn1aP39689 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn1aP39689 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn1aP39689 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkn1aP39689 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdkn1aP39689 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn1aP39689 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn1aP39689 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.3■□□□□ 0.52
Cdkn1aP39689 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkn1aP39689 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkn1aP39689 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms