Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.41■■□□□ 1.5
Sox5P35710 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sox5P35710 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sox5P35710 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sox5P35710 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.41■■□□□ 1.5
Sox5P35710 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.41■■□□□ 1.5
Sox5P35710 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox5P35710 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox5P35710 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox5P35710 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sox5P35710 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.4■■□□□ 1.5
Sox5P35710 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Sox5P35710 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sox5P35710 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Sox5P35710 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox5P35710 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Sox5P35710 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Sox5P35710 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox5P35710 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox5P35710 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Sox5P35710 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sox5P35710 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.37■■□□□ 1.49
Sox5P35710 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sox5P35710 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.37■■□□□ 1.49
Sox5P35710 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox5P35710 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox5P35710 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox5P35710 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox5P35710 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox5P35710 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sox5P35710 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.35■■□□□ 1.49
Sox5P35710 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.34■■□□□ 1.49
Sox5P35710 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sox5P35710 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Sox5P35710 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.34■■□□□ 1.49
Sox5P35710 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sox5P35710 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Sox5P35710 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sox5P35710 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
Sox5P35710 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox5P35710 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.32■■□□□ 1.48
Sox5P35710 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.32■■□□□ 1.48
Sox5P35710 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.32■■□□□ 1.48
Sox5P35710 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Sox5P35710 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sox5P35710 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox5P35710 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox5P35710 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sox5P35710 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sox5P35710 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
Sox5P35710 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox5P35710 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.29■■□□□ 1.48
Sox5P35710 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox5P35710 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.29■■□□□ 1.48
Sox5P35710 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Sox5P35710 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.28■■□□□ 1.48
Sox5P35710 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox5P35710 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox5P35710 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.28■■□□□ 1.48
Sox5P35710 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox5P35710 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox5P35710 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox5P35710 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox5P35710 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox5P35710 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox5P35710 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sox5P35710 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox5P35710 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.26■■□□□ 1.47
Sox5P35710 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox5P35710 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Sox5P35710 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox5P35710 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.25■■□□□ 1.47
Sox5P35710 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Sox5P35710 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.25■■□□□ 1.47
Sox5P35710 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
Sox5P35710 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox5P35710 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sox5P35710 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.25■■□□□ 1.47
Sox5P35710 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox5P35710 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Sox5P35710 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox5P35710 Gm8503-201ENSMUST00000118131 455 ntBASIC24.24■■□□□ 1.47
Sox5P35710 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox5P35710 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Sox5P35710 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.23■■□□□ 1.47
Sox5P35710 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Sox5P35710 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sox5P35710 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sox5P35710 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sox5P35710 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sox5P35710 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox5P35710 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox5P35710 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox5P35710 Gm4799-201ENSMUST00000095396 657 ntBASIC24.21■■□□□ 1.47
Sox5P35710 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox5P35710 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sox5P35710 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Sox5P35710 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sox5P35710 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.19■■□□□ 1.46
Sox5P35710 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms