Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxa1P35582 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxa1P35582 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Foxa1P35582 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.65■□□□□ 0.9
Foxa1P35582 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.65■□□□□ 0.9
Foxa1P35582 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxa1P35582 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Foxa1P35582 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxa1P35582 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxa1P35582 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.64■□□□□ 0.89
Foxa1P35582 Mir6538-201ENSMUST00000183713 110 ntBASIC20.64■□□□□ 0.89
Foxa1P35582 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxa1P35582 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Foxa1P35582 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.63■□□□□ 0.89
Foxa1P35582 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxa1P35582 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxa1P35582 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxa1P35582 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.62■□□□□ 0.89
Foxa1P35582 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.62■□□□□ 0.89
Foxa1P35582 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxa1P35582 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
Foxa1P35582 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxa1P35582 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxa1P35582 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxa1P35582 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxa1P35582 Gm44428-201ENSMUST00000204474 874 ntBASIC20.61■□□□□ 0.89
Foxa1P35582 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Foxa1P35582 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxa1P35582 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Foxa1P35582 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxa1P35582 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxa1P35582 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxa1P35582 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxa1P35582 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Foxa1P35582 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxa1P35582 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxa1P35582 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxa1P35582 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Foxa1P35582 Gm27502-201ENSMUST00000183495 199 ntBASIC20.58■□□□□ 0.89
Foxa1P35582 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxa1P35582 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.57■□□□□ 0.88
Foxa1P35582 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.57■□□□□ 0.88
Foxa1P35582 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Foxa1P35582 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Foxa1P35582 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxa1P35582 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Foxa1P35582 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxa1P35582 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxa1P35582 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.56■□□□□ 0.88
Foxa1P35582 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Foxa1P35582 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxa1P35582 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
Foxa1P35582 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Foxa1P35582 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxa1P35582 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Foxa1P35582 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxa1P35582 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxa1P35582 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.55■□□□□ 0.88
Foxa1P35582 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Foxa1P35582 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxa1P35582 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.54■□□□□ 0.88
Foxa1P35582 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.54■□□□□ 0.88
Foxa1P35582 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Foxa1P35582 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxa1P35582 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Foxa1P35582 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxa1P35582 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxa1P35582 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxa1P35582 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxa1P35582 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxa1P35582 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxa1P35582 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxa1P35582 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxa1P35582 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxa1P35582 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Foxa1P35582 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxa1P35582 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxa1P35582 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Foxa1P35582 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxa1P35582 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxa1P35582 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Foxa1P35582 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxa1P35582 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Foxa1P35582 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.49■□□□□ 0.87
Foxa1P35582 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Foxa1P35582 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Foxa1P35582 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxa1P35582 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxa1P35582 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.48■□□□□ 0.87
Foxa1P35582 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa1P35582 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Foxa1P35582 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Foxa1P35582 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms