Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.69■□□□□ 0.42
Rom1P32958 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rom1P32958 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.68■□□□□ 0.42
Rom1P32958 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rom1P32958 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Gm24970-201ENSMUST00000175582 82 ntBASIC17.68■□□□□ 0.42
Rom1P32958 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.68■□□□□ 0.42
Rom1P32958 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.68■□□□□ 0.42
Rom1P32958 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rom1P32958 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
Rom1P32958 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rom1P32958 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rom1P32958 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.67■□□□□ 0.42
Rom1P32958 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rom1P32958 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
Rom1P32958 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rom1P32958 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rom1P32958 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.66■□□□□ 0.42
Rom1P32958 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rom1P32958 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rom1P32958 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rom1P32958 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.65■□□□□ 0.42
Rom1P32958 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rom1P32958 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rom1P32958 Zfp131-205ENSMUST00000223812 663 ntBASIC17.64■□□□□ 0.41
Rom1P32958 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rom1P32958 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rom1P32958 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rom1P32958 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rom1P32958 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rom1P32958 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rom1P32958 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rom1P32958 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rom1P32958 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rom1P32958 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rom1P32958 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.6■□□□□ 0.41
Rom1P32958 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rom1P32958 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rom1P32958 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rom1P32958 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.58■□□□□ 0.4
Rom1P32958 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rom1P32958 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rom1P32958 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rom1P32958 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rom1P32958 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.57■□□□□ 0.4
Rom1P32958 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rom1P32958 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rom1P32958 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Rom1P32958 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.56■□□□□ 0.4
Rom1P32958 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.56■□□□□ 0.4
Rom1P32958 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rom1P32958 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Gm9397-201ENSMUST00000200125 605 ntBASIC17.55■□□□□ 0.4
Rom1P32958 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rom1P32958 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms