Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb2P0C1T1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb2P0C1T1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxb2P0C1T1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hoxb2P0C1T1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb2P0C1T1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb2P0C1T1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb2P0C1T1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb2P0C1T1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb2P0C1T1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb2P0C1T1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb2P0C1T1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb2P0C1T1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb2P0C1T1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb2P0C1T1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb2P0C1T1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxb2P0C1T1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb2P0C1T1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb2P0C1T1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxb2P0C1T1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb2P0C1T1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb2P0C1T1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hoxb2P0C1T1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hoxb2P0C1T1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb2P0C1T1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxb2P0C1T1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb2P0C1T1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.39■□□□□ 0.69
Hoxb2P0C1T1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb2P0C1T1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.39■□□□□ 0.69
Hoxb2P0C1T1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb2P0C1T1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb2P0C1T1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb2P0C1T1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb2P0C1T1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb2P0C1T1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb2P0C1T1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb2P0C1T1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
Hoxb2P0C1T1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxb2P0C1T1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb2P0C1T1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb2P0C1T1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb2P0C1T1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxb2P0C1T1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb2P0C1T1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxb2P0C1T1 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.33■□□□□ 0.68
Hoxb2P0C1T1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxb2P0C1T1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hoxb2P0C1T1 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.32■□□□□ 0.68
Hoxb2P0C1T1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb2P0C1T1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb2P0C1T1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxb2P0C1T1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxb2P0C1T1 Gm5921-201ENSMUST00000075898 882 ntBASIC19.3■□□□□ 0.68
Hoxb2P0C1T1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxb2P0C1T1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hoxb2P0C1T1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxb2P0C1T1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms