Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Notumos-201ENSMUST00000151998 2659 ntBASIC19.43■□□□□ 0.7
P04224 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.43■□□□□ 0.7
P04224 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.43■□□□□ 0.7
P04224 Gm30023-201ENSMUST00000197970 889 ntBASIC19.43■□□□□ 0.7
P04224 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
P04224 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
P04224 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04224 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04224 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.42■□□□□ 0.7
P04224 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.42■□□□□ 0.7
P04224 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.42■□□□□ 0.7
P04224 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P04224 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.41■□□□□ 0.7
P04224 Gm45855-201ENSMUST00000212546 880 ntBASIC19.41■□□□□ 0.7
P04224 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04224 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04224 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
P04224 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04224 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04224 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04224 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04224 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04224 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P04224 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P04224 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
P04224 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04224 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04224 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P04224 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04224 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P04224 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P04224 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04224 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P04224 Particl-201ENSMUST00000205370 1560 ntBASIC19.36■□□□□ 0.69
P04224 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04224 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
P04224 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04224 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04224 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04224 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04224 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
P04224 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P04224 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04224 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.33■□□□□ 0.69
P04224 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04224 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04224 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.33■□□□□ 0.68
P04224 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04224 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04224 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04224 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04224 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04224 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04224 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P04224 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04224 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
P04224 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
P04224 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04224 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
P04224 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04224 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04224 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
P04224 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04224 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04224 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
P04224 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
P04224 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
P04224 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04224 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.29■□□□□ 0.68
P04224 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04224 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04224 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P04224 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
P04224 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.28■□□□□ 0.68
P04224 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04224 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04224 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04224 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04224 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04224 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
P04224 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms