Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CfdP03953 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CfdP03953 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.72■□□□□ 0.59
CfdP03953 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CfdP03953 Gm24970-201ENSMUST00000175582 82 ntBASIC18.72■□□□□ 0.59
CfdP03953 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CfdP03953 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CfdP03953 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CfdP03953 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CfdP03953 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CfdP03953 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CfdP03953 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
CfdP03953 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CfdP03953 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CfdP03953 Zfp131-205ENSMUST00000223812 663 ntBASIC18.7■□□□□ 0.58
CfdP03953 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CfdP03953 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.69■□□□□ 0.58
CfdP03953 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.69■□□□□ 0.58
CfdP03953 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CfdP03953 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CfdP03953 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CfdP03953 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CfdP03953 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CfdP03953 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CfdP03953 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CfdP03953 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CfdP03953 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CfdP03953 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CfdP03953 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CfdP03953 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.66■□□□□ 0.58
CfdP03953 Gm9397-201ENSMUST00000200125 605 ntBASIC18.66■□□□□ 0.58
CfdP03953 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CfdP03953 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CfdP03953 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CfdP03953 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CfdP03953 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.65■□□□□ 0.58
CfdP03953 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.65■□□□□ 0.58
CfdP03953 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CfdP03953 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CfdP03953 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CfdP03953 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CfdP03953 Notumos-201ENSMUST00000151998 2659 ntBASIC18.64■□□□□ 0.57
CfdP03953 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CfdP03953 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CfdP03953 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CfdP03953 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CfdP03953 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CfdP03953 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CfdP03953 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.62■□□□□ 0.57
CfdP03953 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CfdP03953 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CfdP03953 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CfdP03953 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CfdP03953 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CfdP03953 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.6■□□□□ 0.57
CfdP03953 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CfdP03953 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.6■□□□□ 0.57
CfdP03953 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CfdP03953 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CfdP03953 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CfdP03953 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CfdP03953 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CfdP03953 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CfdP03953 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CfdP03953 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.58■□□□□ 0.56
CfdP03953 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CfdP03953 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
CfdP03953 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CfdP03953 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.57■□□□□ 0.56
CfdP03953 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CfdP03953 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CfdP03953 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CfdP03953 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CfdP03953 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.57■□□□□ 0.56
CfdP03953 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CfdP03953 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CfdP03953 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CfdP03953 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CfdP03953 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CfdP03953 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CfdP03953 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CfdP03953 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CfdP03953 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CfdP03953 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms