Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClppO88696 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ClppO88696 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ClppO88696 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.68■■□□□ 1.06
ClppO88696 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ClppO88696 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ClppO88696 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ClppO88696 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ClppO88696 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ClppO88696 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.67■■□□□ 1.06
ClppO88696 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ClppO88696 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ClppO88696 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClppO88696 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClppO88696 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ClppO88696 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ClppO88696 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ClppO88696 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ClppO88696 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ClppO88696 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ClppO88696 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ClppO88696 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.63■■□□□ 1.05
ClppO88696 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ClppO88696 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClppO88696 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.62■■□□□ 1.05
ClppO88696 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.62■■□□□ 1.05
ClppO88696 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.62■■□□□ 1.05
ClppO88696 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClppO88696 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ClppO88696 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
ClppO88696 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.61■■□□□ 1.05
ClppO88696 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ClppO88696 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ClppO88696 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClppO88696 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClppO88696 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClppO88696 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClppO88696 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ClppO88696 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ClppO88696 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ClppO88696 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ClppO88696 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ClppO88696 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ClppO88696 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.57■■□□□ 1.04
ClppO88696 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.57■■□□□ 1.04
ClppO88696 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ClppO88696 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ClppO88696 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ClppO88696 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ClppO88696 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ClppO88696 Gm10420-201ENSMUST00000121713 882 ntBASIC21.56■■□□□ 1.04
ClppO88696 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.56■■□□□ 1.04
ClppO88696 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ClppO88696 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.56■■□□□ 1.04
ClppO88696 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ClppO88696 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ClppO88696 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClppO88696 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.55■■□□□ 1.04
ClppO88696 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClppO88696 Gm44428-201ENSMUST00000204474 874 ntBASIC21.55■■□□□ 1.04
ClppO88696 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClppO88696 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClppO88696 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ClppO88696 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.54■■□□□ 1.04
ClppO88696 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ClppO88696 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.54■■□□□ 1.04
ClppO88696 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ClppO88696 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ClppO88696 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClppO88696 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.53■■□□□ 1.04
ClppO88696 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ClppO88696 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.53■■□□□ 1.04
ClppO88696 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
ClppO88696 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClppO88696 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClppO88696 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ClppO88696 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ClppO88696 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ClppO88696 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.51■■□□□ 1.03
ClppO88696 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.51■■□□□ 1.03
ClppO88696 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClppO88696 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClppO88696 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClppO88696 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.5■■□□□ 1.03
ClppO88696 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ClppO88696 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ClppO88696 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ClppO88696 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ClppO88696 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ClppO88696 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ClppO88696 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.47■■□□□ 1.03
ClppO88696 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ClppO88696 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ClppO88696 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ClppO88696 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms