Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a2O88627 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a2O88627 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc28a2O88627 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a2O88627 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc28a2O88627 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a2O88627 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a2O88627 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a2O88627 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.66■□□□□ 0.74
Slc28a2O88627 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a2O88627 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc28a2O88627 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a2O88627 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a2O88627 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc28a2O88627 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Slc28a2O88627 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc28a2O88627 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc28a2O88627 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a2O88627 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a2O88627 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a2O88627 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.63■□□□□ 0.73
Slc28a2O88627 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a2O88627 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc28a2O88627 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a2O88627 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a2O88627 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a2O88627 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Slc28a2O88627 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc28a2O88627 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.62■□□□□ 0.73
Slc28a2O88627 Gm11599-201ENSMUST00000118720 878 ntBASIC19.62■□□□□ 0.73
Slc28a2O88627 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc28a2O88627 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Slc28a2O88627 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a2O88627 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc28a2O88627 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc28a2O88627 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a2O88627 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a2O88627 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc28a2O88627 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a2O88627 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a2O88627 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc28a2O88627 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.59■□□□□ 0.73
Slc28a2O88627 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.59■□□□□ 0.73
Slc28a2O88627 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a2O88627 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a2O88627 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a2O88627 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a2O88627 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc28a2O88627 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slc28a2O88627 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc28a2O88627 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc28a2O88627 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc28a2O88627 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc28a2O88627 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc28a2O88627 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Slc28a2O88627 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc28a2O88627 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc28a2O88627 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc28a2O88627 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
Slc28a2O88627 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc28a2O88627 Gm4799-201ENSMUST00000095396 657 ntBASIC19.56■□□□□ 0.72
Slc28a2O88627 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc28a2O88627 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc28a2O88627 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc28a2O88627 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc28a2O88627 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc28a2O88627 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.55■□□□□ 0.72
Slc28a2O88627 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc28a2O88627 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc28a2O88627 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc28a2O88627 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Slc28a2O88627 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc28a2O88627 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc28a2O88627 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc28a2O88627 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slc28a2O88627 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Slc28a2O88627 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc28a2O88627 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Slc28a2O88627 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc28a2O88627 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc28a2O88627 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc28a2O88627 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Slc28a2O88627 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc28a2O88627 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc28a2O88627 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc28a2O88627 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc28a2O88627 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc28a2O88627 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc28a2O88627 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc28a2O88627 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms