Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.55■□□□□ 0.88
Cops4O88544 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops4O88544 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops4O88544 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.53■□□□□ 0.88
Cops4O88544 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops4O88544 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cops4O88544 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops4O88544 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cops4O88544 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops4O88544 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cops4O88544 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops4O88544 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops4O88544 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops4O88544 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops4O88544 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.51■□□□□ 0.87
Cops4O88544 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cops4O88544 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cops4O88544 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.5■□□□□ 0.87
Cops4O88544 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.5■□□□□ 0.87
Cops4O88544 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cops4O88544 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cops4O88544 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cops4O88544 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops4O88544 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cops4O88544 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cops4O88544 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.47■□□□□ 0.87
Cops4O88544 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cops4O88544 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cops4O88544 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cops4O88544 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops4O88544 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cops4O88544 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops4O88544 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops4O88544 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.45■□□□□ 0.86
Cops4O88544 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops4O88544 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cops4O88544 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops4O88544 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cops4O88544 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.44■□□□□ 0.86
Cops4O88544 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Cops4O88544 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops4O88544 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cops4O88544 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops4O88544 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.43■□□□□ 0.86
Cops4O88544 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops4O88544 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops4O88544 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops4O88544 Nkain2-201ENSMUST00000092602 558 ntBASIC20.42■□□□□ 0.86
Cops4O88544 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.42■□□□□ 0.86
Cops4O88544 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cops4O88544 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops4O88544 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops4O88544 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops4O88544 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.41■□□□□ 0.86
Cops4O88544 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops4O88544 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cops4O88544 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cops4O88544 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops4O88544 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops4O88544 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops4O88544 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.39■□□□□ 0.86
Cops4O88544 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops4O88544 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cops4O88544 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cops4O88544 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cops4O88544 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cops4O88544 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cops4O88544 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Cops4O88544 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops4O88544 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cops4O88544 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cops4O88544 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.37■□□□□ 0.85
Cops4O88544 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops4O88544 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cops4O88544 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cops4O88544 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.36■□□□□ 0.85
Cops4O88544 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cops4O88544 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.36■□□□□ 0.85
Cops4O88544 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.36■□□□□ 0.85
Cops4O88544 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 703.5 ms