Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacna1hO88427 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacna1hO88427 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.57■■□□□ 1.2
Cacna1hO88427 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.55■■□□□ 1.2
Cacna1hO88427 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.55■■□□□ 1.2
Cacna1hO88427 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Cacna1hO88427 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cacna1hO88427 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cacna1hO88427 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacna1hO88427 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cacna1hO88427 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacna1hO88427 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.53■■□□□ 1.2
Cacna1hO88427 Gm27454-201ENSMUST00000185090 204 ntBASIC22.53■■□□□ 1.2
Cacna1hO88427 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1hO88427 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1hO88427 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1hO88427 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1hO88427 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Cacna1hO88427 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.52■■□□□ 1.2
Cacna1hO88427 Gm29257-201ENSMUST00000186115 639 ntBASIC22.52■■□□□ 1.2
Cacna1hO88427 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.52■■□□□ 1.2
Cacna1hO88427 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.52■■□□□ 1.2
Cacna1hO88427 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Cacna1hO88427 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Cacna1hO88427 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.51■■□□□ 1.19
Cacna1hO88427 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacna1hO88427 Gm8495-201ENSMUST00000188740 694 ntBASIC22.49■■□□□ 1.19
Cacna1hO88427 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1hO88427 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1hO88427 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cacna1hO88427 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.48■■□□□ 1.19
Cacna1hO88427 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cacna1hO88427 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Cacna1hO88427 Gm12821-201ENSMUST00000120022 600 ntBASIC22.47■■□□□ 1.19
Cacna1hO88427 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.47■■□□□ 1.19
Cacna1hO88427 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Cacna1hO88427 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.46■■□□□ 1.19
Cacna1hO88427 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Cacna1hO88427 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1hO88427 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Cacna1hO88427 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1hO88427 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.45■■□□□ 1.18
Cacna1hO88427 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1hO88427 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1hO88427 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacna1hO88427 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cacna1hO88427 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cacna1hO88427 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
Cacna1hO88427 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1hO88427 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1hO88427 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1hO88427 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Cacna1hO88427 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1hO88427 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.42■■□□□ 1.18
Cacna1hO88427 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1hO88427 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1hO88427 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.41■■□□□ 1.18
Cacna1hO88427 Gm45417-201ENSMUST00000209533 758 ntBASIC22.41■■□□□ 1.18
Cacna1hO88427 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Cacna1hO88427 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1hO88427 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1hO88427 Gm22238-201ENSMUST00000175222 88 ntBASIC22.4■■□□□ 1.18
Cacna1hO88427 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cacna1hO88427 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cacna1hO88427 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cacna1hO88427 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.39■■□□□ 1.17
Cacna1hO88427 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.39■■□□□ 1.17
Cacna1hO88427 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cacna1hO88427 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.38■■□□□ 1.17
Cacna1hO88427 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cacna1hO88427 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cacna1hO88427 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Cacna1hO88427 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cacna1hO88427 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cacna1hO88427 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cacna1hO88427 Gm18284-201ENSMUST00000172604 624 ntBASIC22.36■■□□□ 1.17
Cacna1hO88427 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1hO88427 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.36■■□□□ 1.17
Cacna1hO88427 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1hO88427 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1hO88427 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.36■■□□□ 1.17
Cacna1hO88427 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.36■■□□□ 1.17
Cacna1hO88427 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.36■■□□□ 1.17
Cacna1hO88427 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1hO88427 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Cacna1hO88427 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cacna1hO88427 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cacna1hO88427 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cacna1hO88427 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.35■■□□□ 1.17
Cacna1hO88427 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1hO88427 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cacna1hO88427 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.34■■□□□ 1.17
Cacna1hO88427 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.34■■□□□ 1.17
Cacna1hO88427 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms