Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sigmar1O55242 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sigmar1O55242 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sigmar1O55242 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sigmar1O55242 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sigmar1O55242 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sigmar1O55242 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Sigmar1O55242 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sigmar1O55242 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Sigmar1O55242 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sigmar1O55242 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Sigmar1O55242 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sigmar1O55242 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Sigmar1O55242 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sigmar1O55242 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Sigmar1O55242 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sigmar1O55242 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sigmar1O55242 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sigmar1O55242 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sigmar1O55242 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sigmar1O55242 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sigmar1O55242 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sigmar1O55242 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sigmar1O55242 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sigmar1O55242 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sigmar1O55242 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sigmar1O55242 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sigmar1O55242 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sigmar1O55242 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sigmar1O55242 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sigmar1O55242 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sigmar1O55242 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sigmar1O55242 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sigmar1O55242 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sigmar1O55242 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sigmar1O55242 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.29■□□□□ 0.04
Sigmar1O55242 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sigmar1O55242 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sigmar1O55242 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sigmar1O55242 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sigmar1O55242 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sigmar1O55242 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sigmar1O55242 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Sigmar1O55242 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sigmar1O55242 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sigmar1O55242 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sigmar1O55242 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sigmar1O55242 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sigmar1O55242 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sigmar1O55242 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sigmar1O55242 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sigmar1O55242 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.25■□□□□ 0.03
Sigmar1O55242 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sigmar1O55242 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.24■□□□□ 0.03
Sigmar1O55242 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.24■□□□□ 0.03
Sigmar1O55242 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Sigmar1O55242 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.24■□□□□ 0.03
Sigmar1O55242 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.24■□□□□ 0.03
Sigmar1O55242 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sigmar1O55242 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sigmar1O55242 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sigmar1O55242 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sigmar1O55242 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sigmar1O55242 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sigmar1O55242 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms