Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf13O54965 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf13O54965 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf13O54965 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf13O54965 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf13O54965 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf13O54965 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf13O54965 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf13O54965 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf13O54965 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Rnf13O54965 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.14■□□□□ 0.81
Rnf13O54965 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rnf13O54965 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf13O54965 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf13O54965 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rnf13O54965 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf13O54965 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf13O54965 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf13O54965 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf13O54965 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf13O54965 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Rnf13O54965 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf13O54965 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf13O54965 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf13O54965 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf13O54965 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf13O54965 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf13O54965 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf13O54965 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf13O54965 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf13O54965 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf13O54965 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf13O54965 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf13O54965 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.08■□□□□ 0.8
Rnf13O54965 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf13O54965 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.07■□□□□ 0.8
Rnf13O54965 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.06■□□□□ 0.8
Rnf13O54965 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.06■□□□□ 0.8
Rnf13O54965 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf13O54965 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf13O54965 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rnf13O54965 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf13O54965 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf13O54965 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf13O54965 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.04■□□□□ 0.8
Rnf13O54965 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf13O54965 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf13O54965 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf13O54965 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf13O54965 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf13O54965 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf13O54965 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf13O54965 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf13O54965 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf13O54965 Gm6821-201ENSMUST00000107540 542 ntBASIC20.02■□□□□ 0.8
Rnf13O54965 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf13O54965 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf13O54965 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf13O54965 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf13O54965 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf13O54965 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf13O54965 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.01■□□□□ 0.79
Rnf13O54965 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rnf13O54965 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rnf13O54965 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf13O54965 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf13O54965 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf13O54965 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf13O54965 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf13O54965 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf13O54965 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf13O54965 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.98■□□□□ 0.79
Rnf13O54965 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rnf13O54965 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf13O54965 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf13O54965 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms