Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.4■□□□□ 0.86
Hps1O08983 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hps1O08983 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hps1O08983 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hps1O08983 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hps1O08983 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hps1O08983 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hps1O08983 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hps1O08983 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.39■□□□□ 0.85
Hps1O08983 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hps1O08983 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hps1O08983 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.38■□□□□ 0.85
Hps1O08983 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hps1O08983 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
Hps1O08983 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.38■□□□□ 0.85
Hps1O08983 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hps1O08983 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hps1O08983 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hps1O08983 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hps1O08983 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hps1O08983 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Hps1O08983 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hps1O08983 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hps1O08983 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.37■□□□□ 0.85
Hps1O08983 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hps1O08983 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hps1O08983 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hps1O08983 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hps1O08983 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hps1O08983 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hps1O08983 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.36■□□□□ 0.85
Hps1O08983 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hps1O08983 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hps1O08983 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hps1O08983 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Hps1O08983 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.35■□□□□ 0.85
Hps1O08983 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hps1O08983 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hps1O08983 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hps1O08983 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hps1O08983 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Hps1O08983 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hps1O08983 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hps1O08983 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hps1O08983 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hps1O08983 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.33■□□□□ 0.85
Hps1O08983 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hps1O08983 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hps1O08983 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hps1O08983 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Hps1O08983 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hps1O08983 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hps1O08983 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hps1O08983 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.31■□□□□ 0.84
Hps1O08983 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hps1O08983 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hps1O08983 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hps1O08983 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.31■□□□□ 0.84
Hps1O08983 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hps1O08983 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Hps1O08983 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hps1O08983 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hps1O08983 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hps1O08983 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hps1O08983 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hps1O08983 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hps1O08983 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hps1O08983 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hps1O08983 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hps1O08983 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hps1O08983 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.28■□□□□ 0.84
Hps1O08983 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hps1O08983 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hps1O08983 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hps1O08983 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.27■□□□□ 0.84
Hps1O08983 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.27■□□□□ 0.84
Hps1O08983 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.27■□□□□ 0.84
Hps1O08983 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hps1O08983 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hps1O08983 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Hps1O08983 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Hps1O08983 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hps1O08983 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.26■□□□□ 0.83
Hps1O08983 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hps1O08983 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hps1O08983 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hps1O08983 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hps1O08983 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hps1O08983 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hps1O08983 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hps1O08983 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.24■□□□□ 0.83
Hps1O08983 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hps1O08983 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hps1O08983 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.23■□□□□ 0.83
Hps1O08983 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hps1O08983 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Hps1O08983 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 168.1 ms