Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf4lE9Q2N0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cpsf4lE9Q2N0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4lE9Q2N0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf4lE9Q2N0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf4lE9Q2N0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf4lE9Q2N0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4lE9Q2N0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf4lE9Q2N0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Gm44428-201ENSMUST00000204474 874 ntBASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4lE9Q2N0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf4lE9Q2N0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4lE9Q2N0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4lE9Q2N0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.9■□□□□ 0.62
Cpsf4lE9Q2N0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpsf4lE9Q2N0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.89■□□□□ 0.62
Cpsf4lE9Q2N0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpsf4lE9Q2N0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4lE9Q2N0 Mir6538-201ENSMUST00000183713 110 ntBASIC18.89■□□□□ 0.61
Cpsf4lE9Q2N0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4lE9Q2N0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4lE9Q2N0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4lE9Q2N0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf4lE9Q2N0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4lE9Q2N0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4lE9Q2N0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cpsf4lE9Q2N0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4lE9Q2N0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cpsf4lE9Q2N0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4lE9Q2N0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4lE9Q2N0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4lE9Q2N0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4lE9Q2N0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf4lE9Q2N0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4lE9Q2N0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4lE9Q2N0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4lE9Q2N0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4lE9Q2N0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4lE9Q2N0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4lE9Q2N0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4lE9Q2N0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf4lE9Q2N0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.83■□□□□ 0.6
Cpsf4lE9Q2N0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf4lE9Q2N0 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.81■□□□□ 0.6
Cpsf4lE9Q2N0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4lE9Q2N0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.81■□□□□ 0.6
Cpsf4lE9Q2N0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.81■□□□□ 0.6
Cpsf4lE9Q2N0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4lE9Q2N0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4lE9Q2N0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4lE9Q2N0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4lE9Q2N0 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.78■□□□□ 0.6
Cpsf4lE9Q2N0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4lE9Q2N0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms