Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.36■■□□□ 1.81
Usp42B2RQC2 Mir6538-201ENSMUST00000183713 110 ntBASIC26.36■■□□□ 1.81
Usp42B2RQC2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp42B2RQC2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp42B2RQC2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.34■■□□□ 1.81
Usp42B2RQC2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp42B2RQC2 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.33■■□□□ 1.81
Usp42B2RQC2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Usp42B2RQC2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.33■■□□□ 1.81
Usp42B2RQC2 Gm44428-201ENSMUST00000204474 874 ntBASIC26.33■■□□□ 1.81
Usp42B2RQC2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Usp42B2RQC2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp42B2RQC2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp42B2RQC2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp42B2RQC2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp42B2RQC2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Usp42B2RQC2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp42B2RQC2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp42B2RQC2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp42B2RQC2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp42B2RQC2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.28■■□□□ 1.8
Usp42B2RQC2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Usp42B2RQC2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Usp42B2RQC2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Usp42B2RQC2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp42B2RQC2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp42B2RQC2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.8
Usp42B2RQC2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
Usp42B2RQC2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp42B2RQC2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp42B2RQC2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp42B2RQC2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp42B2RQC2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Usp42B2RQC2 Gm27502-201ENSMUST00000183495 199 ntBASIC26.24■■□□□ 1.79
Usp42B2RQC2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp42B2RQC2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp42B2RQC2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp42B2RQC2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp42B2RQC2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Usp42B2RQC2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Usp42B2RQC2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp42B2RQC2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Usp42B2RQC2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp42B2RQC2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Usp42B2RQC2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Usp42B2RQC2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Usp42B2RQC2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp42B2RQC2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Usp42B2RQC2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.19■■□□□ 1.78
Usp42B2RQC2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp42B2RQC2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Usp42B2RQC2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp42B2RQC2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp42B2RQC2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp42B2RQC2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp42B2RQC2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Usp42B2RQC2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.17■■□□□ 1.78
Usp42B2RQC2 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.17■■□□□ 1.78
Usp42B2RQC2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Usp42B2RQC2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp42B2RQC2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp42B2RQC2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Usp42B2RQC2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Usp42B2RQC2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp42B2RQC2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.15■■□□□ 1.78
Usp42B2RQC2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp42B2RQC2 Gm14523-201ENSMUST00000117260 558 ntBASIC26.14■■□□□ 1.78
Usp42B2RQC2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Usp42B2RQC2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Usp42B2RQC2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Usp42B2RQC2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.13■■□□□ 1.77
Usp42B2RQC2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp42B2RQC2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp42B2RQC2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.13■■□□□ 1.77
Usp42B2RQC2 Gm12366-201ENSMUST00000121722 873 ntBASIC26.13■■□□□ 1.77
Usp42B2RQC2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.13■■□□□ 1.77
Usp42B2RQC2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp42B2RQC2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.13■■□□□ 1.77
Usp42B2RQC2 Gm5786-201ENSMUST00000085368 882 ntBASIC26.13■■□□□ 1.77
Usp42B2RQC2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp42B2RQC2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Usp42B2RQC2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.12■■□□□ 1.77
Usp42B2RQC2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp42B2RQC2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.12■■□□□ 1.77
Usp42B2RQC2 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.12■■□□□ 1.77
Usp42B2RQC2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp42B2RQC2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Usp42B2RQC2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms