Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem116A0A0G2JGD3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem116A0A0G2JGD3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem116A0A0G2JGD3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Tmem116A0A0G2JGD3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem116A0A0G2JGD3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.58■□□□□ 0.56
Tmem116A0A0G2JGD3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.58■□□□□ 0.56
Tmem116A0A0G2JGD3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem116A0A0G2JGD3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem116A0A0G2JGD3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem116A0A0G2JGD3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem116A0A0G2JGD3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem116A0A0G2JGD3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem116A0A0G2JGD3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.57■□□□□ 0.56
Tmem116A0A0G2JGD3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem116A0A0G2JGD3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.56■□□□□ 0.56
Tmem116A0A0G2JGD3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem116A0A0G2JGD3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem116A0A0G2JGD3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Tmem116A0A0G2JGD3 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.55■□□□□ 0.56
Tmem116A0A0G2JGD3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem116A0A0G2JGD3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem116A0A0G2JGD3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem116A0A0G2JGD3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem116A0A0G2JGD3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem116A0A0G2JGD3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem116A0A0G2JGD3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tmem116A0A0G2JGD3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem116A0A0G2JGD3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem116A0A0G2JGD3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmem116A0A0G2JGD3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmem116A0A0G2JGD3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tmem116A0A0G2JGD3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem116A0A0G2JGD3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tmem116A0A0G2JGD3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem116A0A0G2JGD3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem116A0A0G2JGD3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem116A0A0G2JGD3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem116A0A0G2JGD3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem116A0A0G2JGD3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem116A0A0G2JGD3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem116A0A0G2JGD3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Gm10420-201ENSMUST00000121713 882 ntBASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem116A0A0G2JGD3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem116A0A0G2JGD3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem116A0A0G2JGD3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms