Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv26A0A0B4J1P5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv26A0A0B4J1P5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv26A0A0B4J1P5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trbv26A0A0B4J1P5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm44428-201ENSMUST00000204474 874 ntBASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv26A0A0B4J1P5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv26A0A0B4J1P5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv26A0A0B4J1P5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm27502-201ENSMUST00000183495 199 ntBASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv26A0A0B4J1P5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv26A0A0B4J1P5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv26A0A0B4J1P5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv26A0A0B4J1P5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm12366-201ENSMUST00000121722 873 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm5786-201ENSMUST00000085368 882 ntBASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv26A0A0B4J1P5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv26A0A0B4J1P5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms