Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav9-4A0A0B4J1K2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-4A0A0B4J1K2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-4A0A0B4J1K2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-4A0A0B4J1K2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9-4A0A0B4J1K2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9-4A0A0B4J1K2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-4A0A0B4J1K2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Trav9-4A0A0B4J1K2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.67■□□□□ 0.26
Trav9-4A0A0B4J1K2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9-4A0A0B4J1K2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav9-4A0A0B4J1K2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9-4A0A0B4J1K2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9-4A0A0B4J1K2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.64■□□□□ 0.26
Trav9-4A0A0B4J1K2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Mir6538-201ENSMUST00000183713 110 ntBASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9-4A0A0B4J1K2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav9-4A0A0B4J1K2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-4A0A0B4J1K2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav9-4A0A0B4J1K2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-4A0A0B4J1K2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9-4A0A0B4J1K2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Gm27502-201ENSMUST00000183495 199 ntBASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9-4A0A0B4J1K2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9-4A0A0B4J1K2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 Gm44428-201ENSMUST00000204474 874 ntBASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav9-4A0A0B4J1K2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9-4A0A0B4J1K2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9-4A0A0B4J1K2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trav9-4A0A0B4J1K2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9-4A0A0B4J1K2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9-4A0A0B4J1K2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9-4A0A0B4J1K2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9-4A0A0B4J1K2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav9-4A0A0B4J1K2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9-4A0A0B4J1K2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.58■□□□□ 0.24
Trav9-4A0A0B4J1K2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9-4A0A0B4J1K2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-4A0A0B4J1K2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav9-4A0A0B4J1K2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms