Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav17A0A075B655 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav17A0A075B655 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav17A0A075B655 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav17A0A075B655 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav17A0A075B655 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav17A0A075B655 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav17A0A075B655 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav17A0A075B655 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav17A0A075B655 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Trav17A0A075B655 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav17A0A075B655 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav17A0A075B655 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.68■□□□□ 0.42
Trav17A0A075B655 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav17A0A075B655 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav17A0A075B655 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.67■□□□□ 0.42
Trav17A0A075B655 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav17A0A075B655 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav17A0A075B655 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav17A0A075B655 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav17A0A075B655 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav17A0A075B655 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav17A0A075B655 Gm37136-201ENSMUST00000194368 194 ntBASIC17.65■□□□□ 0.42
Trav17A0A075B655 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav17A0A075B655 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav17A0A075B655 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav17A0A075B655 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav17A0A075B655 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav17A0A075B655 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav17A0A075B655 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav17A0A075B655 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav17A0A075B655 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav17A0A075B655 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav17A0A075B655 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Trav17A0A075B655 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav17A0A075B655 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav17A0A075B655 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav17A0A075B655 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav17A0A075B655 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav17A0A075B655 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav17A0A075B655 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trav17A0A075B655 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav17A0A075B655 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav17A0A075B655 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav17A0A075B655 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav17A0A075B655 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav17A0A075B655 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav17A0A075B655 Nkain2-201ENSMUST00000092602 558 ntBASIC17.59■□□□□ 0.41
Trav17A0A075B655 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav17A0A075B655 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav17A0A075B655 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav17A0A075B655 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav17A0A075B655 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav17A0A075B655 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav17A0A075B655 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav17A0A075B655 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav17A0A075B655 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav17A0A075B655 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav17A0A075B655 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav17A0A075B655 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms