Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav6n-5A0A075B621 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-5A0A075B621 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav6n-5A0A075B621 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-5A0A075B621 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.33■□□□□ 0.36
Trav6n-5A0A075B621 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-5A0A075B621 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-5A0A075B621 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav6n-5A0A075B621 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Gm24804-201ENSMUST00000174982 85 ntBASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav6n-5A0A075B621 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-5A0A075B621 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-5A0A075B621 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-5A0A075B621 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-5A0A075B621 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-5A0A075B621 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-5A0A075B621 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav6n-5A0A075B621 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6n-5A0A075B621 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-5A0A075B621 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-5A0A075B621 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-5A0A075B621 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-5A0A075B621 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-5A0A075B621 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav6n-5A0A075B621 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav6n-5A0A075B621 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-5A0A075B621 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6n-5A0A075B621 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-5A0A075B621 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-5A0A075B621 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Trav6n-5A0A075B621 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-5A0A075B621 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.21■□□□□ 0.34
Trav6n-5A0A075B621 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.2■□□□□ 0.34
Trav6n-5A0A075B621 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-5A0A075B621 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav6n-5A0A075B621 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms