Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm5cP41230 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Kdm5cP41230 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC21.31■■□□□ 1
Kdm5cP41230 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC21.3■■□□□ 1
Kdm5cP41230 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC21.3■■□□□ 1
Kdm5cP41230 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Mup-ps23-201ENSMUST00000118063 630 ntBASIC21.3■■□□□ 1
Kdm5cP41230 Gm42693-201ENSMUST00000196779 631 ntBASIC21.3■■□□□ 1
Kdm5cP41230 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Kdm5cP41230 Gm7446-201ENSMUST00000221035 1240 ntBASIC21.3■■□□□ 1
Kdm5cP41230 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Kdm5cP41230 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Ccdc166-201ENSMUST00000182172 2584 ntBASIC21.3■■□□□ 1
Kdm5cP41230 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.3■■□□□ 1
Kdm5cP41230 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kdm5cP41230 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Kdm5cP41230 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 AC166574.6-201ENSMUST00000227889 1806 ntBASIC21.29■■□□□ 1
Kdm5cP41230 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 AC093043.3-201ENSMUST00000226531 2273 ntBASIC21.29■■□□□ 1
Kdm5cP41230 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Kdm5cP41230 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Kdm5cP41230 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC21.29■■□□□ 1
Kdm5cP41230 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Gm44799-201ENSMUST00000207639 1202 ntBASIC21.29■■□□□ 1
Kdm5cP41230 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm5cP41230 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC21.29■■□□□ 1
Kdm5cP41230 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Mir692-1-201ENSMUST00000102263 109 ntBASIC21.28■■□□□ 1
Kdm5cP41230 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Gm17420-201ENSMUST00000164753 153 ntBASIC21.28■■□□□ 1
Kdm5cP41230 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC21.28■■□□□ 1
Kdm5cP41230 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm5cP41230 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Kdm5cP41230 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC21.27■■□□□ 1
Kdm5cP41230 Gm18307-201ENSMUST00000206864 949 ntBASIC21.27■■□□□ 1
Kdm5cP41230 Gm5425-201ENSMUST00000214125 459 ntBASIC21.27■■□□□ 1
Kdm5cP41230 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Kdm5cP41230 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm5cP41230 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm5cP41230 Gm23931-201ENSMUST00000103842 109 ntBASIC21.27■□□□□ 0.99
Kdm5cP41230 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC21.27■□□□□ 0.99
Kdm5cP41230 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC21.27■□□□□ 0.99
Kdm5cP41230 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm5cP41230 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC21.27■□□□□ 0.99
Kdm5cP41230 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC21.27■□□□□ 0.99
Kdm5cP41230 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm5cP41230 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm5cP41230 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm5cP41230 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.26■□□□□ 0.99
Kdm5cP41230 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm5cP41230 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm5cP41230 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm5cP41230 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms