Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
4933424G06RikA0A140LIP3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
4933424G06RikA0A140LIP3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Gm7774-201ENSMUST00000200064 533 ntBASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms