Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hoxb3P09026 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxb3P09026 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.87□□□□□ -0.03
Hoxb3P09026 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxb3P09026 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxb3P09026 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm13453-201ENSMUST00000118708 357 ntBASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.86□□□□□ -0.03
Hoxb3P09026 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.86□□□□□ -0.03
Hoxb3P09026 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxb3P09026 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.85□□□□□ -0.03
Hoxb3P09026 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxb3P09026 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gm12091-201ENSMUST00000146791 830 ntBASIC14.85□□□□□ -0.03
Hoxb3P09026 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb3P09026 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
Hoxb3P09026 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb3P09026 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hoxb3P09026 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb3P09026 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb3P09026 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms