Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb3S4R1G7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb3S4R1G7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb3S4R1G7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb3S4R1G7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb3S4R1G7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb3S4R1G7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb3S4R1G7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
H2afb3S4R1G7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
H2afb3S4R1G7 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb3S4R1G7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H2afb3S4R1G7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.01■□□□□ 0.79
H2afb3S4R1G7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
H2afb3S4R1G7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb3S4R1G7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb3S4R1G7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
H2afb3S4R1G7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb3S4R1G7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20■□□□□ 0.79
H2afb3S4R1G7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb3S4R1G7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20■□□□□ 0.79
H2afb3S4R1G7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb3S4R1G7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
H2afb3S4R1G7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb3S4R1G7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
H2afb3S4R1G7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H2afb3S4R1G7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb3S4R1G7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb3S4R1G7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb3S4R1G7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb3S4R1G7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Gm4799-201ENSMUST00000095396 657 ntBASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb3S4R1G7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb3S4R1G7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
H2afb3S4R1G7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
H2afb3S4R1G7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb3S4R1G7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb3S4R1G7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.93■□□□□ 0.78
H2afb3S4R1G7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.93■□□□□ 0.78
H2afb3S4R1G7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb3S4R1G7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms