Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.1■□□□□ 0.65
Col13a1Q9R1N9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Terc-201ENSMUST00000082862 423 ntBASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col13a1Q9R1N9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col13a1Q9R1N9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col13a1Q9R1N9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Col13a1Q9R1N9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col13a1Q9R1N9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col13a1Q9R1N9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.06■□□□□ 0.64
Col13a1Q9R1N9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.06■□□□□ 0.64
Col13a1Q9R1N9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col13a1Q9R1N9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col13a1Q9R1N9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col13a1Q9R1N9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Col13a1Q9R1N9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col13a1Q9R1N9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.05■□□□□ 0.64
Col13a1Q9R1N9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.04■□□□□ 0.64
Col13a1Q9R1N9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col13a1Q9R1N9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col13a1Q9R1N9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col13a1Q9R1N9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col13a1Q9R1N9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col13a1Q9R1N9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col13a1Q9R1N9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Serp2-204ENSMUST00000228055 705 ntBASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col13a1Q9R1N9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19■□□□□ 0.63
Col13a1Q9R1N9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col13a1Q9R1N9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col13a1Q9R1N9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col13a1Q9R1N9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col13a1Q9R1N9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col13a1Q9R1N9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.99■□□□□ 0.63
Col13a1Q9R1N9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col13a1Q9R1N9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col13a1Q9R1N9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col13a1Q9R1N9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col13a1Q9R1N9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col13a1Q9R1N9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col13a1Q9R1N9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col13a1Q9R1N9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col13a1Q9R1N9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col13a1Q9R1N9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col13a1Q9R1N9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col13a1Q9R1N9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.96■□□□□ 0.63
Col13a1Q9R1N9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col13a1Q9R1N9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col13a1Q9R1N9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col13a1Q9R1N9 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.95■□□□□ 0.62
Col13a1Q9R1N9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col13a1Q9R1N9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col13a1Q9R1N9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.93■□□□□ 0.62
Col13a1Q9R1N9 Gm44428-201ENSMUST00000204474 874 ntBASIC18.93■□□□□ 0.62
Col13a1Q9R1N9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col13a1Q9R1N9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col13a1Q9R1N9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms