Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rita1Q9D1H0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rita1Q9D1H0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rita1Q9D1H0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rita1Q9D1H0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rita1Q9D1H0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rita1Q9D1H0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rita1Q9D1H0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rita1Q9D1H0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rita1Q9D1H0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.91■□□□□ 0.94
Rita1Q9D1H0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rita1Q9D1H0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.9■□□□□ 0.94
Rita1Q9D1H0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.9■□□□□ 0.94
Rita1Q9D1H0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rita1Q9D1H0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Rita1Q9D1H0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.89■□□□□ 0.93
Rita1Q9D1H0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rita1Q9D1H0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rita1Q9D1H0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rita1Q9D1H0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Rita1Q9D1H0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rita1Q9D1H0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rita1Q9D1H0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rita1Q9D1H0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rita1Q9D1H0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rita1Q9D1H0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.87■□□□□ 0.93
Rita1Q9D1H0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rita1Q9D1H0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.86■□□□□ 0.93
Rita1Q9D1H0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Gm7332-201ENSMUST00000118351 454 ntBASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rita1Q9D1H0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rita1Q9D1H0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rita1Q9D1H0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rita1Q9D1H0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rita1Q9D1H0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rita1Q9D1H0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rita1Q9D1H0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rita1Q9D1H0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rita1Q9D1H0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.79■□□□□ 0.92
Rita1Q9D1H0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rita1Q9D1H0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rita1Q9D1H0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rita1Q9D1H0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Rita1Q9D1H0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rita1Q9D1H0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rita1Q9D1H0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rita1Q9D1H0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rita1Q9D1H0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rita1Q9D1H0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rita1Q9D1H0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rita1Q9D1H0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rita1Q9D1H0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rita1Q9D1H0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rita1Q9D1H0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rita1Q9D1H0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rita1Q9D1H0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rita1Q9D1H0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rita1Q9D1H0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rita1Q9D1H0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms