Protein–RNA interactions for Protein: Q9CQH0

Pdzk1ip1, PDZK1-interacting protein 1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzk1ip1Q9CQH0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzk1ip1Q9CQH0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzk1ip1Q9CQH0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzk1ip1Q9CQH0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzk1ip1Q9CQH0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzk1ip1Q9CQH0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzk1ip1Q9CQH0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pdzk1ip1Q9CQH0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzk1ip1Q9CQH0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.4■□□□□ 0.7
Pdzk1ip1Q9CQH0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.4■□□□□ 0.7
Pdzk1ip1Q9CQH0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzk1ip1Q9CQH0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pdzk1ip1Q9CQH0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzk1ip1Q9CQH0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzk1ip1Q9CQH0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzk1ip1Q9CQH0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzk1ip1Q9CQH0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzk1ip1Q9CQH0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzk1ip1Q9CQH0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzk1ip1Q9CQH0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzk1ip1Q9CQH0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pdzk1ip1Q9CQH0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.37■□□□□ 0.69
Pdzk1ip1Q9CQH0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzk1ip1Q9CQH0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdzk1ip1Q9CQH0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzk1ip1Q9CQH0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzk1ip1Q9CQH0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pdzk1ip1Q9CQH0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdzk1ip1Q9CQH0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pdzk1ip1Q9CQH0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdzk1ip1Q9CQH0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pdzk1ip1Q9CQH0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzk1ip1Q9CQH0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.33■□□□□ 0.68
Pdzk1ip1Q9CQH0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.33■□□□□ 0.68
Pdzk1ip1Q9CQH0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdzk1ip1Q9CQH0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gm8109-201ENSMUST00000194076 746 ntBASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdzk1ip1Q9CQH0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdzk1ip1Q9CQH0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzk1ip1Q9CQH0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzk1ip1Q9CQH0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdzk1ip1Q9CQH0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdzk1ip1Q9CQH0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzk1ip1Q9CQH0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.28■□□□□ 0.68
Pdzk1ip1Q9CQH0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzk1ip1Q9CQH0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdzk1ip1Q9CQH0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdzk1ip1Q9CQH0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pdzk1ip1Q9CQH0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzk1ip1Q9CQH0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pdzk1ip1Q9CQH0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzk1ip1Q9CQH0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdzk1ip1Q9CQH0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms