Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Pcdhgc3Q91XX1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc3Q91XX1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc3Q91XX1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc3Q91XX1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc3Q91XX1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc3Q91XX1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Pcdhgc3Q91XX1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc3Q91XX1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhgc3Q91XX1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc3Q91XX1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhgc3Q91XX1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.25■□□□□ 0.99
Pcdhgc3Q91XX1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc3Q91XX1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc3Q91XX1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc3Q91XX1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhgc3Q91XX1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.24■□□□□ 0.99
Pcdhgc3Q91XX1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc3Q91XX1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc3Q91XX1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhgc3Q91XX1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc3Q91XX1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhgc3Q91XX1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc3Q91XX1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhgc3Q91XX1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhgc3Q91XX1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdhgc3Q91XX1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhgc3Q91XX1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhgc3Q91XX1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgc3Q91XX1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc3Q91XX1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc3Q91XX1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhgc3Q91XX1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc3Q91XX1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgc3Q91XX1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc3Q91XX1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.16■□□□□ 0.98
Pcdhgc3Q91XX1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc3Q91XX1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgc3Q91XX1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhgc3Q91XX1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhgc3Q91XX1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc3Q91XX1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgc3Q91XX1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc3Q91XX1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.14■□□□□ 0.98
Pcdhgc3Q91XX1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgc3Q91XX1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgc3Q91XX1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgc3Q91XX1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgc3Q91XX1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc3Q91XX1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc3Q91XX1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc3Q91XX1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgc3Q91XX1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhgc3Q91XX1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc3Q91XX1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc3Q91XX1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Pcdhgc3Q91XX1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgc3Q91XX1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc3Q91XX1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc3Q91XX1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgc3Q91XX1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc3Q91XX1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhgc3Q91XX1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc3Q91XX1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc3Q91XX1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc3Q91XX1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc3Q91XX1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc3Q91XX1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc3Q91XX1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.08■□□□□ 0.97
Pcdhgc3Q91XX1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgc3Q91XX1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc3Q91XX1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhgc3Q91XX1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc3Q91XX1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc3Q91XX1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
Pcdhgc3Q91XX1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Pcdhgc3Q91XX1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc3Q91XX1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc3Q91XX1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhgc3Q91XX1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc3Q91XX1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc3Q91XX1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc3Q91XX1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms