Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf4Q8K4J2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Ebf4Q8K4J2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf4Q8K4J2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf4Q8K4J2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf4Q8K4J2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf4Q8K4J2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf4Q8K4J2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf4Q8K4J2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.6■□□□□ 0.89
Ebf4Q8K4J2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
Ebf4Q8K4J2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Gm30023-201ENSMUST00000197970 889 ntBASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ebf4Q8K4J2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ebf4Q8K4J2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ebf4Q8K4J2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ebf4Q8K4J2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ebf4Q8K4J2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf4Q8K4J2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf4Q8K4J2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf4Q8K4J2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ebf4Q8K4J2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ebf4Q8K4J2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Ebf4Q8K4J2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ebf4Q8K4J2 Gm16148-201ENSMUST00000119653 893 ntBASIC20.55■□□□□ 0.88
Ebf4Q8K4J2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf4Q8K4J2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf4Q8K4J2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf4Q8K4J2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf4Q8K4J2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf4Q8K4J2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf4Q8K4J2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf4Q8K4J2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ebf4Q8K4J2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ebf4Q8K4J2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ebf4Q8K4J2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ebf4Q8K4J2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ebf4Q8K4J2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.87
Ebf4Q8K4J2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf4Q8K4J2 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 Gm24804-201ENSMUST00000174982 85 ntBASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf4Q8K4J2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf4Q8K4J2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf4Q8K4J2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf4Q8K4J2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf4Q8K4J2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf4Q8K4J2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf4Q8K4J2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.48■□□□□ 0.87
Ebf4Q8K4J2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ebf4Q8K4J2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ebf4Q8K4J2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ebf4Q8K4J2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ebf4Q8K4J2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ebf4Q8K4J2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ebf4Q8K4J2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Ebf4Q8K4J2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ebf4Q8K4J2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf4Q8K4J2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf4Q8K4J2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ebf4Q8K4J2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ebf4Q8K4J2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ebf4Q8K4J2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ebf4Q8K4J2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.44■□□□□ 0.86
Ebf4Q8K4J2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ebf4Q8K4J2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ebf4Q8K4J2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms