Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.93■■□□□ 1.58
Sox30Q8CGW4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sox30Q8CGW4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sox30Q8CGW4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sox30Q8CGW4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sox30Q8CGW4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sox30Q8CGW4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Sox30Q8CGW4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sox30Q8CGW4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sox30Q8CGW4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Sox30Q8CGW4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.91■■□□□ 1.58
Sox30Q8CGW4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sox30Q8CGW4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sox30Q8CGW4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.9■■□□□ 1.58
Sox30Q8CGW4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sox30Q8CGW4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sox30Q8CGW4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sox30Q8CGW4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.89■■□□□ 1.58
Sox30Q8CGW4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sox30Q8CGW4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Sox30Q8CGW4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sox30Q8CGW4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.89■■□□□ 1.57
Sox30Q8CGW4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sox30Q8CGW4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.89■■□□□ 1.57
Sox30Q8CGW4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sox30Q8CGW4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sox30Q8CGW4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.88■■□□□ 1.57
Sox30Q8CGW4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sox30Q8CGW4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sox30Q8CGW4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sox30Q8CGW4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Sox30Q8CGW4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sox30Q8CGW4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sox30Q8CGW4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Sox30Q8CGW4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Sox30Q8CGW4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sox30Q8CGW4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sox30Q8CGW4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sox30Q8CGW4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sox30Q8CGW4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.82■■□□□ 1.56
Sox30Q8CGW4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.82■■□□□ 1.56
Sox30Q8CGW4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.82■■□□□ 1.56
Sox30Q8CGW4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sox30Q8CGW4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sox30Q8CGW4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.81■■□□□ 1.56
Sox30Q8CGW4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sox30Q8CGW4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sox30Q8CGW4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sox30Q8CGW4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sox30Q8CGW4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sox30Q8CGW4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sox30Q8CGW4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sox30Q8CGW4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Sox30Q8CGW4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sox30Q8CGW4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.77■■□□□ 1.56
Sox30Q8CGW4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sox30Q8CGW4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Sox30Q8CGW4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sox30Q8CGW4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Sox30Q8CGW4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Sox30Q8CGW4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sox30Q8CGW4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sox30Q8CGW4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sox30Q8CGW4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sox30Q8CGW4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Sox30Q8CGW4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sox30Q8CGW4 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.74■■□□□ 1.55
Sox30Q8CGW4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sox30Q8CGW4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Sox30Q8CGW4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sox30Q8CGW4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sox30Q8CGW4 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.72■■□□□ 1.55
Sox30Q8CGW4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.72■■□□□ 1.55
Sox30Q8CGW4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sox30Q8CGW4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sox30Q8CGW4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.7■■□□□ 1.55
Sox30Q8CGW4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Sox30Q8CGW4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.7■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms