Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Eri3Q8C460 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.36■■□□□ 1.01
Eri3Q8C460 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Eri3Q8C460 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Eri3Q8C460 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Eri3Q8C460 Gm9806-201ENSMUST00000051080 552 ntBASIC21.35■■□□□ 1.01
Eri3Q8C460 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Eri3Q8C460 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Eri3Q8C460 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Eri3Q8C460 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Eri3Q8C460 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Eri3Q8C460 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Eri3Q8C460 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Eri3Q8C460 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.33■■□□□ 1
Eri3Q8C460 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Eri3Q8C460 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
Eri3Q8C460 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.32■■□□□ 1
Eri3Q8C460 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Eri3Q8C460 Gm16437-201ENSMUST00000025669 507 ntBASIC21.32■■□□□ 1
Eri3Q8C460 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Eri3Q8C460 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Eri3Q8C460 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.31■■□□□ 1
Eri3Q8C460 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.31■■□□□ 1
Eri3Q8C460 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.31■■□□□ 1
Eri3Q8C460 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Eri3Q8C460 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Eri3Q8C460 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Eri3Q8C460 Gm11687-201ENSMUST00000118911 886 ntBASIC21.3■■□□□ 1
Eri3Q8C460 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Eri3Q8C460 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Eri3Q8C460 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.29■■□□□ 1
Eri3Q8C460 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Eri3Q8C460 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.29■■□□□ 1
Eri3Q8C460 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.29■■□□□ 1
Eri3Q8C460 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Eri3Q8C460 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Eri3Q8C460 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Eri3Q8C460 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.28■■□□□ 1
Eri3Q8C460 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.28■■□□□ 1
Eri3Q8C460 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.28■■□□□ 1
Eri3Q8C460 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Eri3Q8C460 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Eri3Q8C460 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Eri3Q8C460 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Eri3Q8C460 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Eri3Q8C460 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Eri3Q8C460 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Eri3Q8C460 Gm11175-201ENSMUST00000116172 543 ntBASIC21.25■□□□□ 0.99
Eri3Q8C460 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Eri3Q8C460 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Eri3Q8C460 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Eri3Q8C460 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Eri3Q8C460 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.23■□□□□ 0.99
Eri3Q8C460 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Eri3Q8C460 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Eri3Q8C460 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.23■□□□□ 0.99
Eri3Q8C460 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Eri3Q8C460 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.22■□□□□ 0.99
Eri3Q8C460 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.22■□□□□ 0.99
Eri3Q8C460 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Eri3Q8C460 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Eri3Q8C460 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Eri3Q8C460 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Eri3Q8C460 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Eri3Q8C460 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Eri3Q8C460 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Eri3Q8C460 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.19■□□□□ 0.98
Eri3Q8C460 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Eri3Q8C460 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Eri3Q8C460 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.19■□□□□ 0.98
Eri3Q8C460 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Eri3Q8C460 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Eri3Q8C460 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms