Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cpsf7Q8BTV2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cpsf7Q8BTV2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.6■■□□□ 1.21
Cpsf7Q8BTV2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cpsf7Q8BTV2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cpsf7Q8BTV2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cpsf7Q8BTV2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cpsf7Q8BTV2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cpsf7Q8BTV2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cpsf7Q8BTV2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cpsf7Q8BTV2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Cpsf7Q8BTV2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cpsf7Q8BTV2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cpsf7Q8BTV2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cpsf7Q8BTV2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Cpsf7Q8BTV2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpsf7Q8BTV2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpsf7Q8BTV2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cpsf7Q8BTV2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.56■■□□□ 1.2
Cpsf7Q8BTV2 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.56■■□□□ 1.2
Cpsf7Q8BTV2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cpsf7Q8BTV2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cpsf7Q8BTV2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cpsf7Q8BTV2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cpsf7Q8BTV2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cpsf7Q8BTV2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cpsf7Q8BTV2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cpsf7Q8BTV2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cpsf7Q8BTV2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cpsf7Q8BTV2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.53■■□□□ 1.2
Cpsf7Q8BTV2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cpsf7Q8BTV2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cpsf7Q8BTV2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cpsf7Q8BTV2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cpsf7Q8BTV2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cpsf7Q8BTV2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cpsf7Q8BTV2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cpsf7Q8BTV2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.51■■□□□ 1.19
Cpsf7Q8BTV2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.51■■□□□ 1.19
Cpsf7Q8BTV2 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.5■■□□□ 1.19
Cpsf7Q8BTV2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cpsf7Q8BTV2 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.5■■□□□ 1.19
Cpsf7Q8BTV2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Cpsf7Q8BTV2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Cpsf7Q8BTV2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cpsf7Q8BTV2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.49■■□□□ 1.19
Cpsf7Q8BTV2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cpsf7Q8BTV2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Cpsf7Q8BTV2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cpsf7Q8BTV2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cpsf7Q8BTV2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cpsf7Q8BTV2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cpsf7Q8BTV2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cpsf7Q8BTV2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cpsf7Q8BTV2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cpsf7Q8BTV2 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.44■■□□□ 1.18
Cpsf7Q8BTV2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cpsf7Q8BTV2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cpsf7Q8BTV2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cpsf7Q8BTV2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cpsf7Q8BTV2 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.43■■□□□ 1.18
Cpsf7Q8BTV2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cpsf7Q8BTV2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cpsf7Q8BTV2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.41■■□□□ 1.18
Cpsf7Q8BTV2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cpsf7Q8BTV2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cpsf7Q8BTV2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cpsf7Q8BTV2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cpsf7Q8BTV2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cpsf7Q8BTV2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cpsf7Q8BTV2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cpsf7Q8BTV2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cpsf7Q8BTV2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.38■■□□□ 1.17
Cpsf7Q8BTV2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 552.3 ms