Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smndc1Q8BGT7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smndc1Q8BGT7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smndc1Q8BGT7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smndc1Q8BGT7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smndc1Q8BGT7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smndc1Q8BGT7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smndc1Q8BGT7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smndc1Q8BGT7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smndc1Q8BGT7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smndc1Q8BGT7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Smndc1Q8BGT7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smndc1Q8BGT7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smndc1Q8BGT7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.57■■□□□ 1.04
Smndc1Q8BGT7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 Nkain2-201ENSMUST00000092602 558 ntBASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smndc1Q8BGT7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smndc1Q8BGT7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smndc1Q8BGT7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smndc1Q8BGT7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smndc1Q8BGT7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.52■■□□□ 1.03
Smndc1Q8BGT7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smndc1Q8BGT7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.51■■□□□ 1.03
Smndc1Q8BGT7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Smndc1Q8BGT7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smndc1Q8BGT7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smndc1Q8BGT7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smndc1Q8BGT7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smndc1Q8BGT7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smndc1Q8BGT7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smndc1Q8BGT7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smndc1Q8BGT7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smndc1Q8BGT7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.49■■□□□ 1.03
Smndc1Q8BGT7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Smndc1Q8BGT7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smndc1Q8BGT7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Smndc1Q8BGT7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Smndc1Q8BGT7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smndc1Q8BGT7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smndc1Q8BGT7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smndc1Q8BGT7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.47■■□□□ 1.03
Smndc1Q8BGT7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Smndc1Q8BGT7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smndc1Q8BGT7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smndc1Q8BGT7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.46■■□□□ 1.03
Smndc1Q8BGT7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Smndc1Q8BGT7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smndc1Q8BGT7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smndc1Q8BGT7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Smndc1Q8BGT7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smndc1Q8BGT7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Smndc1Q8BGT7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.44■■□□□ 1.02
Smndc1Q8BGT7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smndc1Q8BGT7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smndc1Q8BGT7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smndc1Q8BGT7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms