Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Gm44044-201ENSMUST00000205178 1089 ntBASIC21.75■■□□□ 1.07
Skida1Q80YR3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.75■■□□□ 1.07
Skida1Q80YR3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Skida1Q80YR3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Skida1Q80YR3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Skida1Q80YR3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Skida1Q80YR3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.74■■□□□ 1.07
Skida1Q80YR3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Skida1Q80YR3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Skida1Q80YR3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Skida1Q80YR3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Skida1Q80YR3 Gm9812-201ENSMUST00000061934 968 ntBASIC21.71■■□□□ 1.07
Skida1Q80YR3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Skida1Q80YR3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.7■■□□□ 1.06
Skida1Q80YR3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Skida1Q80YR3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Skida1Q80YR3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.7■■□□□ 1.06
Skida1Q80YR3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Skida1Q80YR3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.69■■□□□ 1.06
Skida1Q80YR3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.69■■□□□ 1.06
Skida1Q80YR3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.69■■□□□ 1.06
Skida1Q80YR3 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Skida1Q80YR3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Skida1Q80YR3 Gm45251-201ENSMUST00000209486 1465 ntBASIC21.68■■□□□ 1.06
Skida1Q80YR3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Skida1Q80YR3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Skida1Q80YR3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Skida1Q80YR3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Skida1Q80YR3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Skida1Q80YR3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Skida1Q80YR3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Skida1Q80YR3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Skida1Q80YR3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Skida1Q80YR3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Skida1Q80YR3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.66■■□□□ 1.06
Skida1Q80YR3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.66■■□□□ 1.06
Skida1Q80YR3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.66■■□□□ 1.06
Skida1Q80YR3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.66■■□□□ 1.06
Skida1Q80YR3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Skida1Q80YR3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.65■■□□□ 1.06
Skida1Q80YR3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Gm44136-201ENSMUST00000203819 1106 ntBASIC21.65■■□□□ 1.06
Skida1Q80YR3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Skida1Q80YR3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Skida1Q80YR3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Skida1Q80YR3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Skida1Q80YR3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.63■■□□□ 1.05
Skida1Q80YR3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Skida1Q80YR3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Skida1Q80YR3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.63■■□□□ 1.05
Skida1Q80YR3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Skida1Q80YR3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Skida1Q80YR3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Skida1Q80YR3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Skida1Q80YR3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Skida1Q80YR3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Skida1Q80YR3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Skida1Q80YR3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Skida1Q80YR3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Skida1Q80YR3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Skida1Q80YR3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Skida1Q80YR3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Skida1Q80YR3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Skida1Q80YR3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Skida1Q80YR3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Skida1Q80YR3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms