Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.78■■□□□ 1.24
Sdf4Q61112 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sdf4Q61112 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.77■■□□□ 1.24
Sdf4Q61112 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Sdf4Q61112 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.23
Sdf4Q61112 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sdf4Q61112 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sdf4Q61112 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Sdf4Q61112 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sdf4Q61112 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sdf4Q61112 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.73■■□□□ 1.23
Sdf4Q61112 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sdf4Q61112 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sdf4Q61112 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.71■■□□□ 1.23
Sdf4Q61112 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Sdf4Q61112 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sdf4Q61112 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.7■■□□□ 1.22
Sdf4Q61112 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Scarna2-201ENSMUST00000157560 414 ntBASIC22.69■■□□□ 1.22
Sdf4Q61112 Gm9806-201ENSMUST00000051080 552 ntBASIC22.69■■□□□ 1.22
Sdf4Q61112 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Sdf4Q61112 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.67■■□□□ 1.22
Sdf4Q61112 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Sdf4Q61112 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.66■■□□□ 1.22
Sdf4Q61112 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.65■■□□□ 1.22
Sdf4Q61112 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sdf4Q61112 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sdf4Q61112 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sdf4Q61112 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sdf4Q61112 Gm11687-201ENSMUST00000118911 886 ntBASIC22.64■■□□□ 1.21
Sdf4Q61112 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Sdf4Q61112 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sdf4Q61112 Gm16437-201ENSMUST00000025669 507 ntBASIC22.62■■□□□ 1.21
Sdf4Q61112 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.61■■□□□ 1.21
Sdf4Q61112 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms