Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim63Q38HM4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim63Q38HM4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim63Q38HM4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim63Q38HM4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trim63Q38HM4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim63Q38HM4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Trim63Q38HM4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim63Q38HM4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim63Q38HM4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim63Q38HM4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim63Q38HM4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim63Q38HM4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim63Q38HM4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim63Q38HM4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim63Q38HM4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Trim63Q38HM4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim63Q38HM4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim63Q38HM4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim63Q38HM4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim63Q38HM4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim63Q38HM4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim63Q38HM4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim63Q38HM4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim63Q38HM4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim63Q38HM4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim63Q38HM4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim63Q38HM4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim63Q38HM4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim63Q38HM4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Trim63Q38HM4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim63Q38HM4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Trim63Q38HM4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim63Q38HM4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim63Q38HM4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim63Q38HM4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim63Q38HM4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim63Q38HM4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Trim63Q38HM4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim63Q38HM4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim63Q38HM4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim63Q38HM4 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.59■□□□□ 0.57
Trim63Q38HM4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Trim63Q38HM4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim63Q38HM4 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.59■□□□□ 0.57
Trim63Q38HM4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim63Q38HM4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim63Q38HM4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Trim63Q38HM4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim63Q38HM4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim63Q38HM4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim63Q38HM4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim63Q38HM4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim63Q38HM4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim63Q38HM4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms