Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf1P81269 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf1P81269 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf1P81269 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf1P81269 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.41■□□□□ 0.7
Atf1P81269 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.41■□□□□ 0.7
Atf1P81269 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf1P81269 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf1P81269 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Atf1P81269 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.4■□□□□ 0.7
Atf1P81269 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atf1P81269 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.4■□□□□ 0.7
Atf1P81269 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf1P81269 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf1P81269 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf1P81269 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atf1P81269 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf1P81269 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.39■□□□□ 0.69
Atf1P81269 Gm7432-201ENSMUST00000210343 879 ntBASIC19.39■□□□□ 0.69
Atf1P81269 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.39■□□□□ 0.69
Atf1P81269 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.38■□□□□ 0.69
Atf1P81269 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf1P81269 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf1P81269 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf1P81269 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf1P81269 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf1P81269 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.37■□□□□ 0.69
Atf1P81269 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Atf1P81269 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf1P81269 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Atf1P81269 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Atf1P81269 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.36■□□□□ 0.69
Atf1P81269 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Atf1P81269 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf1P81269 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.35■□□□□ 0.69
Atf1P81269 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atf1P81269 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf1P81269 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atf1P81269 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf1P81269 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf1P81269 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf1P81269 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf1P81269 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf1P81269 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Atf1P81269 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Atf1P81269 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atf1P81269 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Atf1P81269 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Atf1P81269 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atf1P81269 Gm9812-201ENSMUST00000061934 968 ntBASIC19.33■□□□□ 0.68
Atf1P81269 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf1P81269 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Gm11599-201ENSMUST00000118720 878 ntBASIC19.32■□□□□ 0.68
Atf1P81269 Mir3960-201ENSMUST00000198213 73 ntBASIC19.32■□□□□ 0.68
Atf1P81269 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Atf1P81269 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf1P81269 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Atf1P81269 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atf1P81269 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Atf1P81269 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf1P81269 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf1P81269 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf1P81269 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf1P81269 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.29■□□□□ 0.68
Atf1P81269 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Atf1P81269 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf1P81269 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.28■□□□□ 0.68
Atf1P81269 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf1P81269 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Atf1P81269 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.28■□□□□ 0.68
Atf1P81269 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf1P81269 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf1P81269 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf1P81269 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf1P81269 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.27■□□□□ 0.68
Atf1P81269 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.27■□□□□ 0.68
Atf1P81269 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf1P81269 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.27■□□□□ 0.68
Atf1P81269 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf1P81269 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.27■□□□□ 0.67
Atf1P81269 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.27■□□□□ 0.67
Atf1P81269 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf1P81269 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.26■□□□□ 0.67
Atf1P81269 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atf1P81269 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf1P81269 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.26■□□□□ 0.67
Atf1P81269 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atf1P81269 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf1P81269 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atf1P81269 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf1P81269 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms