Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca1P41233 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Abca1P41233 Gm43566-201ENSMUST00000196851 808 ntBASIC18.56■□□□□ 0.56
Abca1P41233 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Abca1P41233 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca1P41233 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca1P41233 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abca1P41233 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca1P41233 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca1P41233 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abca1P41233 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.54■□□□□ 0.56
Abca1P41233 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca1P41233 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Abca1P41233 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Abca1P41233 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Abca1P41233 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.53■□□□□ 0.56
Abca1P41233 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.53■□□□□ 0.56
Abca1P41233 Rps24-207ENSMUST00000224568 714 ntBASIC18.53■□□□□ 0.56
Abca1P41233 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abca1P41233 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Abca1P41233 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Abca1P41233 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Abca1P41233 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.52■□□□□ 0.56
Abca1P41233 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abca1P41233 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abca1P41233 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca1P41233 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Abca1P41233 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca1P41233 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abca1P41233 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca1P41233 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca1P41233 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Abca1P41233 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abca1P41233 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.51■□□□□ 0.55
Abca1P41233 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abca1P41233 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Abca1P41233 Gm44428-201ENSMUST00000204474 874 ntBASIC18.5■□□□□ 0.55
Abca1P41233 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca1P41233 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Abca1P41233 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abca1P41233 Gm13238-201ENSMUST00000117655 780 ntBASIC18.49■□□□□ 0.55
Abca1P41233 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abca1P41233 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abca1P41233 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Abca1P41233 Gm14117-201ENSMUST00000122417 843 ntBASIC18.49■□□□□ 0.55
Abca1P41233 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abca1P41233 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abca1P41233 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abca1P41233 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Abca1P41233 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Abca1P41233 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.48■□□□□ 0.55
Abca1P41233 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Abca1P41233 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abca1P41233 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Abca1P41233 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.48■□□□□ 0.55
Abca1P41233 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca1P41233 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abca1P41233 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Abca1P41233 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
Abca1P41233 Gm45102-201ENSMUST00000207427 857 ntBASIC18.47■□□□□ 0.55
Abca1P41233 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abca1P41233 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abca1P41233 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.46■□□□□ 0.54
Abca1P41233 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca1P41233 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Abca1P41233 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca1P41233 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.45■□□□□ 0.54
Abca1P41233 Gm15820-201ENSMUST00000201566 728 ntBASIC18.45■□□□□ 0.54
Abca1P41233 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca1P41233 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abca1P41233 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abca1P41233 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca1P41233 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Abca1P41233 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.43■□□□□ 0.54
Abca1P41233 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca1P41233 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca1P41233 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca1P41233 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Abca1P41233 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca1P41233 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Abca1P41233 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Abca1P41233 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Abca1P41233 Gm9959-201ENSMUST00000068277 390 ntBASIC18.42■□□□□ 0.54
Abca1P41233 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Abca1P41233 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca1P41233 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.41■□□□□ 0.54
Abca1P41233 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Abca1P41233 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abca1P41233 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abca1P41233 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Abca1P41233 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abca1P41233 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.39■□□□□ 0.54
Abca1P41233 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abca1P41233 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms