Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd74P04441 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Cd74P04441 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd74P04441 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd74P04441 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd74P04441 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.7■□□□□ 0.58
Cd74P04441 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd74P04441 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd74P04441 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.69■□□□□ 0.58
Cd74P04441 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd74P04441 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd74P04441 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd74P04441 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cd74P04441 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Cd74P04441 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Cd74P04441 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd74P04441 Gm11687-201ENSMUST00000118911 886 ntBASIC18.67■□□□□ 0.58
Cd74P04441 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd74P04441 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cd74P04441 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cd74P04441 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd74P04441 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd74P04441 Scarna2-201ENSMUST00000157560 414 ntBASIC18.66■□□□□ 0.58
Cd74P04441 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd74P04441 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd74P04441 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd74P04441 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cd74P04441 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.65■□□□□ 0.58
Cd74P04441 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.65■□□□□ 0.58
Cd74P04441 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd74P04441 Gm9806-201ENSMUST00000051080 552 ntBASIC18.65■□□□□ 0.58
Cd74P04441 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd74P04441 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Cd74P04441 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Cd74P04441 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd74P04441 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.64■□□□□ 0.57
Cd74P04441 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd74P04441 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd74P04441 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd74P04441 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd74P04441 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd74P04441 Cap2-205ENSMUST00000225824 1634 ntBASIC18.63■□□□□ 0.57
Cd74P04441 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cd74P04441 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cd74P04441 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd74P04441 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd74P04441 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd74P04441 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd74P04441 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.62■□□□□ 0.57
Cd74P04441 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd74P04441 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Cd74P04441 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.61■□□□□ 0.57
Cd74P04441 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd74P04441 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd74P04441 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd74P04441 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd74P04441 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd74P04441 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd74P04441 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cd74P04441 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd74P04441 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd74P04441 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd74P04441 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd74P04441 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.59■□□□□ 0.57
Cd74P04441 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd74P04441 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cd74P04441 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd74P04441 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd74P04441 Gm16437-201ENSMUST00000025669 507 ntBASIC18.58■□□□□ 0.56
Cd74P04441 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cd74P04441 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd74P04441 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.58■□□□□ 0.56
Cd74P04441 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd74P04441 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd74P04441 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.57■□□□□ 0.56
Cd74P04441 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd74P04441 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd74P04441 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd74P04441 Notumos-201ENSMUST00000151998 2659 ntBASIC18.57■□□□□ 0.56
Cd74P04441 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd74P04441 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.57■□□□□ 0.56
Cd74P04441 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd74P04441 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.56■□□□□ 0.56
Cd74P04441 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd74P04441 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cd74P04441 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd74P04441 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd74P04441 Gm45364-201ENSMUST00000210883 159 ntBASIC18.56■□□□□ 0.56
Cd74P04441 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd74P04441 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd74P04441 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd74P04441 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms