Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a1O88207 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.9■□□□□ 0.94
Col5a1O88207 Gm43566-201ENSMUST00000196851 808 ntBASIC20.9■□□□□ 0.94
Col5a1O88207 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col5a1O88207 Gm13238-201ENSMUST00000117655 780 ntBASIC20.89■□□□□ 0.93
Col5a1O88207 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col5a1O88207 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col5a1O88207 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col5a1O88207 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col5a1O88207 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col5a1O88207 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a1O88207 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.88■□□□□ 0.93
Col5a1O88207 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Col5a1O88207 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a1O88207 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
Col5a1O88207 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a1O88207 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.87■□□□□ 0.93
Col5a1O88207 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a1O88207 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a1O88207 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a1O88207 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a1O88207 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a1O88207 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.87■□□□□ 0.93
Col5a1O88207 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a1O88207 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a1O88207 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col5a1O88207 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col5a1O88207 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col5a1O88207 Serp2-204ENSMUST00000228055 705 ntBASIC20.85■□□□□ 0.93
Col5a1O88207 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a1O88207 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Col5a1O88207 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a1O88207 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Col5a1O88207 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a1O88207 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a1O88207 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col5a1O88207 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Col5a1O88207 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.83■□□□□ 0.92
Col5a1O88207 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a1O88207 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a1O88207 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a1O88207 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a1O88207 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Col5a1O88207 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a1O88207 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col5a1O88207 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.82■□□□□ 0.92
Col5a1O88207 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a1O88207 Gm44428-201ENSMUST00000204474 874 ntBASIC20.81■□□□□ 0.92
Col5a1O88207 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a1O88207 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.81■□□□□ 0.92
Col5a1O88207 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.81■□□□□ 0.92
Col5a1O88207 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col5a1O88207 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col5a1O88207 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.8■□□□□ 0.92
Col5a1O88207 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a1O88207 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Col5a1O88207 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Col5a1O88207 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.78■□□□□ 0.92
Col5a1O88207 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a1O88207 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.78■□□□□ 0.92
Col5a1O88207 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a1O88207 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a1O88207 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a1O88207 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.77■□□□□ 0.92
Col5a1O88207 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a1O88207 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.77■□□□□ 0.92
Col5a1O88207 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a1O88207 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.77■□□□□ 0.91
Col5a1O88207 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.76■□□□□ 0.91
Col5a1O88207 Gm9959-201ENSMUST00000068277 390 ntBASIC20.76■□□□□ 0.91
Col5a1O88207 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a1O88207 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a1O88207 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a1O88207 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a1O88207 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.75■□□□□ 0.91
Col5a1O88207 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a1O88207 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a1O88207 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Col5a1O88207 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a1O88207 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.74■□□□□ 0.91
Col5a1O88207 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a1O88207 Gm45444-201ENSMUST00000211394 898 ntBASIC20.74■□□□□ 0.91
Col5a1O88207 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a1O88207 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a1O88207 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.71■□□□□ 0.91
Col5a1O88207 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a1O88207 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a1O88207 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a1O88207 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
Col5a1O88207 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a1O88207 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a1O88207 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a1O88207 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a1O88207 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a1O88207 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms