Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BckdkO55028 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.71■□□□□ 0.91
BckdkO55028 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BckdkO55028 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BckdkO55028 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BckdkO55028 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BckdkO55028 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BckdkO55028 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BckdkO55028 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BckdkO55028 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
BckdkO55028 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BckdkO55028 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BckdkO55028 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BckdkO55028 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
BckdkO55028 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BckdkO55028 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BckdkO55028 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BckdkO55028 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BckdkO55028 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.67■□□□□ 0.9
BckdkO55028 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BckdkO55028 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BckdkO55028 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BckdkO55028 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.65■□□□□ 0.9
BckdkO55028 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.65■□□□□ 0.9
BckdkO55028 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BckdkO55028 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BckdkO55028 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BckdkO55028 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
BckdkO55028 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BckdkO55028 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BckdkO55028 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.64■□□□□ 0.89
BckdkO55028 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.64■□□□□ 0.89
BckdkO55028 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.63■□□□□ 0.89
BckdkO55028 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.63■□□□□ 0.89
BckdkO55028 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.63■□□□□ 0.89
BckdkO55028 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.63■□□□□ 0.89
BckdkO55028 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BckdkO55028 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BckdkO55028 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BckdkO55028 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BckdkO55028 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BckdkO55028 Gm9812-201ENSMUST00000061934 968 ntBASIC20.62■□□□□ 0.89
BckdkO55028 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BckdkO55028 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BckdkO55028 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BckdkO55028 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.61■□□□□ 0.89
BckdkO55028 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BckdkO55028 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.61■□□□□ 0.89
BckdkO55028 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BckdkO55028 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BckdkO55028 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BckdkO55028 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BckdkO55028 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BckdkO55028 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BckdkO55028 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BckdkO55028 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BckdkO55028 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BckdkO55028 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BckdkO55028 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BckdkO55028 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BckdkO55028 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.59■□□□□ 0.89
BckdkO55028 Gm12366-201ENSMUST00000121722 873 ntBASIC20.59■□□□□ 0.89
BckdkO55028 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.59■□□□□ 0.89
BckdkO55028 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.59■□□□□ 0.89
BckdkO55028 Gm5786-201ENSMUST00000085368 882 ntBASIC20.59■□□□□ 0.89
BckdkO55028 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BckdkO55028 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BckdkO55028 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.58■□□□□ 0.89
BckdkO55028 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.58■□□□□ 0.89
BckdkO55028 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
BckdkO55028 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BckdkO55028 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BckdkO55028 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BckdkO55028 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.56■□□□□ 0.88
BckdkO55028 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BckdkO55028 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BckdkO55028 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BckdkO55028 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BckdkO55028 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.54■□□□□ 0.88
BckdkO55028 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BckdkO55028 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BckdkO55028 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BckdkO55028 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BckdkO55028 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BckdkO55028 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BckdkO55028 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.53■□□□□ 0.88
BckdkO55028 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.53■□□□□ 0.88
BckdkO55028 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BckdkO55028 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms