Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.06■□□□□ 0.64
Prrt1O35449 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.06■□□□□ 0.64
Prrt1O35449 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.06■□□□□ 0.64
Prrt1O35449 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prrt1O35449 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prrt1O35449 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prrt1O35449 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Prrt1O35449 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prrt1O35449 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prrt1O35449 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prrt1O35449 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.04■□□□□ 0.64
Prrt1O35449 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.04■□□□□ 0.64
Prrt1O35449 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prrt1O35449 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prrt1O35449 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prrt1O35449 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prrt1O35449 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.04■□□□□ 0.64
Prrt1O35449 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prrt1O35449 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prrt1O35449 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prrt1O35449 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prrt1O35449 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prrt1O35449 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prrt1O35449 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prrt1O35449 Gm30023-201ENSMUST00000197970 889 ntBASIC19.02■□□□□ 0.64
Prrt1O35449 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prrt1O35449 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prrt1O35449 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prrt1O35449 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prrt1O35449 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Prrt1O35449 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prrt1O35449 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Prrt1O35449 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prrt1O35449 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Prrt1O35449 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Prrt1O35449 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prrt1O35449 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prrt1O35449 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prrt1O35449 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prrt1O35449 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Prrt1O35449 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prrt1O35449 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prrt1O35449 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.97■□□□□ 0.63
Prrt1O35449 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prrt1O35449 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.97■□□□□ 0.63
Prrt1O35449 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prrt1O35449 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prrt1O35449 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prrt1O35449 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prrt1O35449 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prrt1O35449 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prrt1O35449 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prrt1O35449 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.95■□□□□ 0.62
Prrt1O35449 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prrt1O35449 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.94■□□□□ 0.62
Prrt1O35449 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prrt1O35449 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Prrt1O35449 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prrt1O35449 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Prrt1O35449 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.94■□□□□ 0.62
Prrt1O35449 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prrt1O35449 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.93■□□□□ 0.62
Prrt1O35449 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Prrt1O35449 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.93■□□□□ 0.62
Prrt1O35449 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prrt1O35449 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.93■□□□□ 0.62
Prrt1O35449 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prrt1O35449 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Prrt1O35449 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.92■□□□□ 0.62
Prrt1O35449 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prrt1O35449 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prrt1O35449 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prrt1O35449 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prrt1O35449 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prrt1O35449 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms