Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12887B1AVM1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12887B1AVM1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.23■□□□□ 0.51
Gm12887B1AVM1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12887B1AVM1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12887B1AVM1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.2■□□□□ 0.5
Gm12887B1AVM1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Gm12887B1AVM1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12887B1AVM1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm12887B1AVM1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm12887B1AVM1 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.18■□□□□ 0.5
Gm12887B1AVM1 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.18■□□□□ 0.5
Gm12887B1AVM1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm12887B1AVM1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.17■□□□□ 0.5
Gm12887B1AVM1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12887B1AVM1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.16■□□□□ 0.5
Gm12887B1AVM1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12887B1AVM1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gm12887B1AVM1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm12887B1AVM1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12887B1AVM1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12887B1AVM1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12887B1AVM1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.12■□□□□ 0.49
Gm12887B1AVM1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12887B1AVM1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12887B1AVM1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12887B1AVM1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12887B1AVM1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12887B1AVM1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12887B1AVM1 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.1■□□□□ 0.49
Gm12887B1AVM1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm12887B1AVM1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12887B1AVM1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms