Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim17A0A504 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim17A0A504 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim17A0A504 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Smim17A0A504 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smim17A0A504 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Smim17A0A504 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smim17A0A504 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smim17A0A504 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smim17A0A504 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.44■□□□□ 0.86
Smim17A0A504 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smim17A0A504 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Smim17A0A504 Notumos-201ENSMUST00000151998 2659 ntBASIC20.43■□□□□ 0.86
Smim17A0A504 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smim17A0A504 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smim17A0A504 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Smim17A0A504 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smim17A0A504 Gm8109-201ENSMUST00000194076 746 ntBASIC20.42■□□□□ 0.86
Smim17A0A504 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smim17A0A504 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smim17A0A504 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smim17A0A504 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.41■□□□□ 0.86
Smim17A0A504 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.41■□□□□ 0.86
Smim17A0A504 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smim17A0A504 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.41■□□□□ 0.86
Smim17A0A504 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smim17A0A504 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smim17A0A504 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smim17A0A504 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smim17A0A504 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Smim17A0A504 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smim17A0A504 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smim17A0A504 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim17A0A504 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim17A0A504 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Smim17A0A504 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smim17A0A504 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim17A0A504 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smim17A0A504 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim17A0A504 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim17A0A504 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smim17A0A504 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim17A0A504 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim17A0A504 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim17A0A504 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim17A0A504 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim17A0A504 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.35■□□□□ 0.85
Smim17A0A504 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim17A0A504 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smim17A0A504 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smim17A0A504 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smim17A0A504 Particl-201ENSMUST00000205370 1560 ntBASIC20.34■□□□□ 0.85
Smim17A0A504 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smim17A0A504 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smim17A0A504 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smim17A0A504 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.33■□□□□ 0.85
Smim17A0A504 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smim17A0A504 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smim17A0A504 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smim17A0A504 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smim17A0A504 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smim17A0A504 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smim17A0A504 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim17A0A504 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim17A0A504 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smim17A0A504 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smim17A0A504 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.31■□□□□ 0.84
Smim17A0A504 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smim17A0A504 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smim17A0A504 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Smim17A0A504 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Smim17A0A504 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smim17A0A504 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smim17A0A504 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim17A0A504 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim17A0A504 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim17A0A504 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim17A0A504 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smim17A0A504 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smim17A0A504 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smim17A0A504 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Smim17A0A504 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Smim17A0A504 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smim17A0A504 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smim17A0A504 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim17A0A504 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim17A0A504 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smim17A0A504 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smim17A0A504 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim17A0A504 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim17A0A504 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms