Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv3-5A0A140T8M6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-5A0A140T8M6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Igkv3-5A0A140T8M6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-5A0A140T8M6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Igkv3-5A0A140T8M6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-5A0A140T8M6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Igkv3-5A0A140T8M6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-5A0A140T8M6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-5A0A140T8M6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Igkv3-5A0A140T8M6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 Nkain2-201ENSMUST00000092602 558 ntBASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-5A0A140T8M6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Igkv3-5A0A140T8M6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-5A0A140T8M6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Igkv3-5A0A140T8M6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-5A0A140T8M6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-5A0A140T8M6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-5A0A140T8M6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Igkv3-5A0A140T8M6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-5A0A140T8M6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.03□□□□□ -0.16
Igkv3-5A0A140T8M6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-5A0A140T8M6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms