Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv16A0A0B4J1H3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv16A0A0B4J1H3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv16A0A0B4J1H3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv16A0A0B4J1H3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv16A0A0B4J1H3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv16A0A0B4J1H3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv16A0A0B4J1H3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv16A0A0B4J1H3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv16A0A0B4J1H3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv16A0A0B4J1H3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
Trbv16A0A0B4J1H3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv16A0A0B4J1H3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv16A0A0B4J1H3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv16A0A0B4J1H3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv16A0A0B4J1H3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv16A0A0B4J1H3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv16A0A0B4J1H3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv16A0A0B4J1H3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv16A0A0B4J1H3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv16A0A0B4J1H3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv16A0A0B4J1H3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv16A0A0B4J1H3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv16A0A0B4J1H3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv16A0A0B4J1H3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv16A0A0B4J1H3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv16A0A0B4J1H3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms